Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sh3rf3Q8C120 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sh3rf3Q8C120 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf3Q8C120 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf3Q8C120 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf3Q8C120 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Gm10493-201ENSMUST00000097270 612 ntBASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf3Q8C120 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sh3rf3Q8C120 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf3Q8C120 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Gm13234-201ENSMUST00000120010 747 ntBASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms