Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Usp47Q8BY87 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC26.64■■□□□ 1.86
Usp47Q8BY87 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC26.64■■□□□ 1.85
Usp47Q8BY87 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
Usp47Q8BY87 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
Usp47Q8BY87 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Usp47Q8BY87 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Usp47Q8BY87 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC26.63■■□□□ 1.85
Usp47Q8BY87 Gm10653-202ENSMUST00000139570 835 ntBASIC26.63■■□□□ 1.85
Usp47Q8BY87 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Usp47Q8BY87 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Usp47Q8BY87 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Usp47Q8BY87 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Usp47Q8BY87 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp47Q8BY87 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp47Q8BY87 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Usp47Q8BY87 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Usp47Q8BY87 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
Usp47Q8BY87 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC26.62■■□□□ 1.85
Usp47Q8BY87 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp47Q8BY87 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp47Q8BY87 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp47Q8BY87 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp47Q8BY87 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC26.61■■□□□ 1.85
Usp47Q8BY87 Gm44672-201ENSMUST00000206944 1098 ntBASIC26.61■■□□□ 1.85
Usp47Q8BY87 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp47Q8BY87 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp47Q8BY87 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp47Q8BY87 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Usp47Q8BY87 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp47Q8BY87 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Usp47Q8BY87 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC26.6■■□□□ 1.85
Usp47Q8BY87 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Usp47Q8BY87 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Usp47Q8BY87 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp47Q8BY87 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Usp47Q8BY87 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Usp47Q8BY87 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Usp47Q8BY87 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Usp47Q8BY87 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC26.59■■□□□ 1.85
Usp47Q8BY87 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Usp47Q8BY87 Gm20049-201ENSMUST00000219950 730 ntBASIC26.59■■□□□ 1.85
Usp47Q8BY87 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Usp47Q8BY87 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Usp47Q8BY87 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
Usp47Q8BY87 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Usp47Q8BY87 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Usp47Q8BY87 Gm8309-201ENSMUST00000206627 1448 ntBASIC26.58■■□□□ 1.85
Usp47Q8BY87 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Usp47Q8BY87 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC26.58■■□□□ 1.85
Usp47Q8BY87 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Usp47Q8BY87 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Usp47Q8BY87 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Usp47Q8BY87 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Usp47Q8BY87 Gm15853-202ENSMUST00000195518 2041 ntBASIC26.58■■□□□ 1.84
Usp47Q8BY87 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
Usp47Q8BY87 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC26.58■■□□□ 1.84
Usp47Q8BY87 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Usp47Q8BY87 AC112142.1-201ENSMUST00000228796 918 ntBASIC26.58■■□□□ 1.84
Usp47Q8BY87 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Usp47Q8BY87 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Usp47Q8BY87 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp47Q8BY87 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Usp47Q8BY87 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC26.57■■□□□ 1.84
Usp47Q8BY87 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp47Q8BY87 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp47Q8BY87 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp47Q8BY87 AC160393.1-201ENSMUST00000218378 1279 ntBASIC26.57■■□□□ 1.84
Usp47Q8BY87 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Usp47Q8BY87 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp47Q8BY87 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp47Q8BY87 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp47Q8BY87 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC26.56■■□□□ 1.84
Usp47Q8BY87 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Usp47Q8BY87 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Usp47Q8BY87 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp47Q8BY87 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Usp47Q8BY87 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp47Q8BY87 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Usp47Q8BY87 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp47Q8BY87 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp47Q8BY87 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
Usp47Q8BY87 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp47Q8BY87 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Usp47Q8BY87 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp47Q8BY87 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Usp47Q8BY87 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp47Q8BY87 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp47Q8BY87 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Usp47Q8BY87 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp47Q8BY87 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp47Q8BY87 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp47Q8BY87 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Usp47Q8BY87 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp47Q8BY87 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp47Q8BY87 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp47Q8BY87 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp47Q8BY87 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC26.53■■□□□ 1.84
Usp47Q8BY87 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
Usp47Q8BY87 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC26.53■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms