Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Snx17Q8BVL3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.91■□□□□ 0.94
Snx17Q8BVL3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Snx17Q8BVL3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Snx17Q8BVL3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Snx17Q8BVL3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx17Q8BVL3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx17Q8BVL3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Gm5417-201ENSMUST00000079706 384 ntBASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx17Q8BVL3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx17Q8BVL3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Snx17Q8BVL3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx17Q8BVL3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Snx17Q8BVL3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.84■□□□□ 0.93
Snx17Q8BVL3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.84■□□□□ 0.93
Snx17Q8BVL3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Snx17Q8BVL3 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.84■□□□□ 0.93
Snx17Q8BVL3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Snx17Q8BVL3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Snx17Q8BVL3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx17Q8BVL3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Snx17Q8BVL3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Snx17Q8BVL3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx17Q8BVL3 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.83■□□□□ 0.93
Snx17Q8BVL3 Gm10819-201ENSMUST00000099988 561 ntBASIC20.83■□□□□ 0.93
Snx17Q8BVL3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Snx17Q8BVL3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.83■□□□□ 0.92
Snx17Q8BVL3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snx17Q8BVL3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snx17Q8BVL3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Snx17Q8BVL3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx17Q8BVL3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Snx17Q8BVL3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx17Q8BVL3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx17Q8BVL3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx17Q8BVL3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms