Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trank1Q8BV79 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.35■□□□□ 0.21
Trank1Q8BV79 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trank1Q8BV79 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.35■□□□□ 0.21
Trank1Q8BV79 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.35■□□□□ 0.21
Trank1Q8BV79 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trank1Q8BV79 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.34■□□□□ 0.21
Trank1Q8BV79 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trank1Q8BV79 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trank1Q8BV79 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.34■□□□□ 0.21
Trank1Q8BV79 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trank1Q8BV79 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trank1Q8BV79 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trank1Q8BV79 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trank1Q8BV79 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.34■□□□□ 0.21
Trank1Q8BV79 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trank1Q8BV79 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trank1Q8BV79 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trank1Q8BV79 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trank1Q8BV79 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trank1Q8BV79 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trank1Q8BV79 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trank1Q8BV79 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trank1Q8BV79 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trank1Q8BV79 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trank1Q8BV79 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.32■□□□□ 0.2
Trank1Q8BV79 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.32■□□□□ 0.2
Trank1Q8BV79 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trank1Q8BV79 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trank1Q8BV79 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trank1Q8BV79 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trank1Q8BV79 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.29■□□□□ 0.2
Trank1Q8BV79 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Gm21814-202ENSMUST00000203277 873 ntBASIC16.29■□□□□ 0.2
Trank1Q8BV79 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trank1Q8BV79 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trank1Q8BV79 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trank1Q8BV79 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trank1Q8BV79 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trank1Q8BV79 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trank1Q8BV79 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trank1Q8BV79 Ank2-226ENSMUST00000189368 339 ntBASIC16.27■□□□□ 0.19
Trank1Q8BV79 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trank1Q8BV79 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trank1Q8BV79 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trank1Q8BV79 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms