Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkl3Q8BLF2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.18■□□□□ 0.18
Cdkl3Q8BLF2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl3Q8BLF2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl3Q8BLF2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl3Q8BLF2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.14■□□□□ 0.18
Cdkl3Q8BLF2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl3Q8BLF2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdkl3Q8BLF2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms