Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr3Q8BL00 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr3Q8BL00 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr3Q8BL00 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cdhr3Q8BL00 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdhr3Q8BL00 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Gm7860-201ENSMUST00000121190 879 ntBASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdhr3Q8BL00 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdhr3Q8BL00 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdhr3Q8BL00 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms