Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop53Q8BK35 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nop53Q8BK35 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nop53Q8BK35 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Nop53Q8BK35 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop53Q8BK35 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop53Q8BK35 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nop53Q8BK35 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop53Q8BK35 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nop53Q8BK35 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop53Q8BK35 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.04■□□□□ 0.8
Nop53Q8BK35 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.04■□□□□ 0.8
Nop53Q8BK35 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.04■□□□□ 0.8
Nop53Q8BK35 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nop53Q8BK35 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop53Q8BK35 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop53Q8BK35 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.03■□□□□ 0.8
Nop53Q8BK35 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop53Q8BK35 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nop53Q8BK35 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop53Q8BK35 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nop53Q8BK35 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nop53Q8BK35 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nop53Q8BK35 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.02■□□□□ 0.8
Nop53Q8BK35 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nop53Q8BK35 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Nop53Q8BK35 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nop53Q8BK35 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nop53Q8BK35 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Gm8493-201ENSMUST00000196881 489 ntBASIC20.01■□□□□ 0.79
Nop53Q8BK35 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nop53Q8BK35 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Gm12251-201ENSMUST00000117893 792 ntBASIC20■□□□□ 0.79
Nop53Q8BK35 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Gm43173-201ENSMUST00000202246 593 ntBASIC20■□□□□ 0.79
Nop53Q8BK35 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Nop53Q8BK35 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Nop53Q8BK35 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nop53Q8BK35 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nop53Q8BK35 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.99■□□□□ 0.79
Nop53Q8BK35 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nop53Q8BK35 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nop53Q8BK35 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms