Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc5a7Q8BGY9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Fst-202ENSMUST00000223640 2612 ntBASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc5a7Q8BGY9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc5a7Q8BGY9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc5a7Q8BGY9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc5a7Q8BGY9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Slc5a7Q8BGY9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms