Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.92■■□□□ 1.1
Samm50Q8BGH2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Samm50Q8BGH2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Samm50Q8BGH2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.92■■□□□ 1.1
Samm50Q8BGH2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Samm50Q8BGH2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Samm50Q8BGH2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Samm50Q8BGH2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.91■■□□□ 1.1
Samm50Q8BGH2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Samm50Q8BGH2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Samm50Q8BGH2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Samm50Q8BGH2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Samm50Q8BGH2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.9■■□□□ 1.1
Samm50Q8BGH2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Samm50Q8BGH2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Samm50Q8BGH2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Samm50Q8BGH2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.89■■□□□ 1.1
Samm50Q8BGH2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Samm50Q8BGH2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
Samm50Q8BGH2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Samm50Q8BGH2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.89■■□□□ 1.09
Samm50Q8BGH2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.89■■□□□ 1.09
Samm50Q8BGH2 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.89■■□□□ 1.09
Samm50Q8BGH2 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.89■■□□□ 1.09
Samm50Q8BGH2 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.89■■□□□ 1.09
Samm50Q8BGH2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Samm50Q8BGH2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Samm50Q8BGH2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Samm50Q8BGH2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Samm50Q8BGH2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Samm50Q8BGH2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Samm50Q8BGH2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Gm27801-201ENSMUST00000184174 223 ntBASIC21.87■■□□□ 1.09
Samm50Q8BGH2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.87■■□□□ 1.09
Samm50Q8BGH2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Samm50Q8BGH2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Samm50Q8BGH2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Samm50Q8BGH2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Samm50Q8BGH2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Samm50Q8BGH2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Samm50Q8BGH2 Grk6-206ENSMUST00000224995 2971 ntBASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Gm9988-201ENSMUST00000069786 435 ntBASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Samm50Q8BGH2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms