Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shank2Q80Z38 Flg-201ENSMUST00000050758 1488 ntBASIC24.49■■□□□ 1.51
Shank2Q80Z38 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shank2Q80Z38 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shank2Q80Z38 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shank2Q80Z38 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shank2Q80Z38 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Shank2Q80Z38 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Shank2Q80Z38 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Shank2Q80Z38 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC24.48■■□□□ 1.51
Shank2Q80Z38 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shank2Q80Z38 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC24.47■■□□□ 1.51
Shank2Q80Z38 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Shank2Q80Z38 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shank2Q80Z38 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
Shank2Q80Z38 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.47■■□□□ 1.51
Shank2Q80Z38 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shank2Q80Z38 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shank2Q80Z38 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shank2Q80Z38 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.46■■□□□ 1.51
Shank2Q80Z38 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Shank2Q80Z38 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Shank2Q80Z38 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Shank2Q80Z38 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Shank2Q80Z38 Gm32699-201ENSMUST00000221728 1988 ntBASIC24.45■■□□□ 1.51
Shank2Q80Z38 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Shank2Q80Z38 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shank2Q80Z38 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC24.45■■□□□ 1.5
Shank2Q80Z38 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Shank2Q80Z38 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Gm43183-201ENSMUST00000200632 547 ntBASIC24.44■■□□□ 1.5
Shank2Q80Z38 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shank2Q80Z38 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shank2Q80Z38 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
Shank2Q80Z38 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shank2Q80Z38 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Shank2Q80Z38 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shank2Q80Z38 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Shank2Q80Z38 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shank2Q80Z38 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shank2Q80Z38 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC24.42■■□□□ 1.5
Shank2Q80Z38 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Shank2Q80Z38 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.41■■□□□ 1.5
Shank2Q80Z38 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Shank2Q80Z38 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Shank2Q80Z38 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Shank2Q80Z38 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shank2Q80Z38 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shank2Q80Z38 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC24.4■■□□□ 1.5
Shank2Q80Z38 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC24.4■■□□□ 1.5
Shank2Q80Z38 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shank2Q80Z38 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Shank2Q80Z38 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shank2Q80Z38 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Shank2Q80Z38 Gm23634-201ENSMUST00000175071 91 ntBASIC24.39■■□□□ 1.5
Shank2Q80Z38 Gm6345-202ENSMUST00000180900 204 ntBASIC24.39■■□□□ 1.5
Shank2Q80Z38 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC24.39■■□□□ 1.5
Shank2Q80Z38 AC160393.1-201ENSMUST00000218378 1279 ntBASIC24.39■■□□□ 1.5
Shank2Q80Z38 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Gm33142-201ENSMUST00000193913 867 ntBASIC24.38■■□□□ 1.49
Shank2Q80Z38 AC156016.1-201ENSMUST00000227190 1035 ntBASIC24.38■■□□□ 1.49
Shank2Q80Z38 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Gm18025-201ENSMUST00000221733 862 ntBASIC24.38■■□□□ 1.49
Shank2Q80Z38 Timm23-208ENSMUST00000226683 750 ntBASIC24.38■■□□□ 1.49
Shank2Q80Z38 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shank2Q80Z38 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Shank2Q80Z38 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Shank2Q80Z38 Gm18032-201ENSMUST00000222541 538 ntBASIC24.37■■□□□ 1.49
Shank2Q80Z38 Otx2os1-204ENSMUST00000227221 751 ntBASIC24.37■■□□□ 1.49
Shank2Q80Z38 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shank2Q80Z38 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Shank2Q80Z38 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms