Protein–RNA interactions for Protein: Q80XU8

Lrfn4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn4Q80XU8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrfn4Q80XU8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Gm13146-201ENSMUST00000118508 780 ntBASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lrfn4Q80XU8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Gm13234-201ENSMUST00000120010 747 ntBASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrfn4Q80XU8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrfn4Q80XU8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Lrfn4Q80XU8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lrfn4Q80XU8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lrfn4Q80XU8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrfn4Q80XU8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Lrfn4Q80XU8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrfn4Q80XU8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrfn4Q80XU8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrfn4Q80XU8 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms