Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim36Q80WG7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim36Q80WG7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim36Q80WG7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim36Q80WG7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim36Q80WG7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim36Q80WG7 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.05■□□□□ 0.48
Trim36Q80WG7 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.05■□□□□ 0.48
Trim36Q80WG7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim36Q80WG7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim36Q80WG7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.03■□□□□ 0.48
Trim36Q80WG7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim36Q80WG7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim36Q80WG7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim36Q80WG7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim36Q80WG7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.02■□□□□ 0.48
Trim36Q80WG7 BC021767-201ENSMUST00000126387 1716 ntBASIC18.02■□□□□ 0.48
Trim36Q80WG7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.02■□□□□ 0.48
Trim36Q80WG7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim36Q80WG7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim36Q80WG7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim36Q80WG7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim36Q80WG7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.02■□□□□ 0.47
Trim36Q80WG7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trim36Q80WG7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim36Q80WG7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim36Q80WG7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim36Q80WG7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trim36Q80WG7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Gm40848-201ENSMUST00000221998 324 ntBASIC18.01■□□□□ 0.47
Trim36Q80WG7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim36Q80WG7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.01■□□□□ 0.47
Trim36Q80WG7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim36Q80WG7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Trim36Q80WG7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 Smad6-203ENSMUST00000179458 273 ntBASIC18■□□□□ 0.47
Trim36Q80WG7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18■□□□□ 0.47
Trim36Q80WG7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim36Q80WG7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms