Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc18Q80WC3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.92■□□□□ 0.62
Tnrc18Q80WC3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Tnrc18Q80WC3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc18Q80WC3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc18Q80WC3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Gm30025-201ENSMUST00000218555 728 ntBASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc18Q80WC3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Gm11539-201ENSMUST00000119837 557 ntBASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Gm13436-201ENSMUST00000120418 567 ntBASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Tnrc18Q80WC3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.89■□□□□ 0.61
Tnrc18Q80WC3 Ank2-226ENSMUST00000189368 339 ntBASIC18.89■□□□□ 0.61
Tnrc18Q80WC3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.89■□□□□ 0.61
Tnrc18Q80WC3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.89■□□□□ 0.61
Tnrc18Q80WC3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnrc18Q80WC3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.89■□□□□ 0.61
Tnrc18Q80WC3 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.88■□□□□ 0.61
Tnrc18Q80WC3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Tnrc18Q80WC3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Gm33142-201ENSMUST00000193913 867 ntBASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc18Q80WC3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Gm23634-201ENSMUST00000175071 91 ntBASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.85■□□□□ 0.61
Tnrc18Q80WC3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.84■□□□□ 0.61
Tnrc18Q80WC3 Gm3375-201ENSMUST00000203929 796 ntBASIC18.84■□□□□ 0.61
Tnrc18Q80WC3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnrc18Q80WC3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnrc18Q80WC3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnrc18Q80WC3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms