Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.96■□□□□ 0.47
Otop1Q80VM9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.96■□□□□ 0.47
Otop1Q80VM9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.96■□□□□ 0.47
Otop1Q80VM9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Otop1Q80VM9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.95■□□□□ 0.46
Otop1Q80VM9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Otop1Q80VM9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Otop1Q80VM9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Otop1Q80VM9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.94■□□□□ 0.46
Otop1Q80VM9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Otop1Q80VM9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Otop1Q80VM9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Otop1Q80VM9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Otop1Q80VM9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Otop1Q80VM9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.94■□□□□ 0.46
Otop1Q80VM9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Otop1Q80VM9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.93■□□□□ 0.46
Otop1Q80VM9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Otop1Q80VM9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.92■□□□□ 0.46
Otop1Q80VM9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Otop1Q80VM9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Otop1Q80VM9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Otop1Q80VM9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Otop1Q80VM9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.9■□□□□ 0.46
Otop1Q80VM9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Otop1Q80VM9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Otop1Q80VM9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.89■□□□□ 0.45
Otop1Q80VM9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms