Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm8493-201ENSMUST00000196881 489 ntBASIC18.73■□□□□ 0.59
Usp8Q80U87 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.73■□□□□ 0.59
Usp8Q80U87 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp8Q80U87 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.73■□□□□ 0.59
Usp8Q80U87 Grk6-206ENSMUST00000224995 2971 ntBASIC18.73■□□□□ 0.59
Usp8Q80U87 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Usp8Q80U87 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.73■□□□□ 0.59
Usp8Q80U87 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp8Q80U87 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp8Q80U87 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Usp8Q80U87 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Usp8Q80U87 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Usp8Q80U87 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Usp8Q80U87 Gm11421-201ENSMUST00000122124 294 ntBASIC18.72■□□□□ 0.59
Usp8Q80U87 Smad6-203ENSMUST00000179458 273 ntBASIC18.72■□□□□ 0.59
Usp8Q80U87 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp8Q80U87 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Usp8Q80U87 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Usp8Q80U87 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Usp8Q80U87 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.71■□□□□ 0.59
Usp8Q80U87 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Usp8Q80U87 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Usp8Q80U87 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Usp8Q80U87 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp8Q80U87 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Usp8Q80U87 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Usp8Q80U87 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Usp8Q80U87 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Usp8Q80U87 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.7■□□□□ 0.58
Usp8Q80U87 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Usp8Q80U87 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Usp8Q80U87 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp8Q80U87 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Usp8Q80U87 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp8Q80U87 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.69■□□□□ 0.58
Usp8Q80U87 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp8Q80U87 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Usp8Q80U87 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.69■□□□□ 0.58
Usp8Q80U87 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp8Q80U87 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp8Q80U87 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp8Q80U87 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp8Q80U87 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp8Q80U87 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Usp8Q80U87 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Usp8Q80U87 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.68■□□□□ 0.58
Usp8Q80U87 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
Usp8Q80U87 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Usp8Q80U87 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.68■□□□□ 0.58
Usp8Q80U87 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Usp8Q80U87 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp8Q80U87 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.67■□□□□ 0.58
Usp8Q80U87 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.67■□□□□ 0.58
Usp8Q80U87 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms