Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.36■□□□□ 0.69
Cspg5Q71M36 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cspg5Q71M36 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.35■□□□□ 0.69
Cspg5Q71M36 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.35■□□□□ 0.69
Cspg5Q71M36 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg5Q71M36 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.34■□□□□ 0.69
Cspg5Q71M36 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.34■□□□□ 0.69
Cspg5Q71M36 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.34■□□□□ 0.69
Cspg5Q71M36 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.33■□□□□ 0.69
Cspg5Q71M36 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.33■□□□□ 0.69
Cspg5Q71M36 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.33■□□□□ 0.68
Cspg5Q71M36 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.33■□□□□ 0.68
Cspg5Q71M36 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cspg5Q71M36 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cspg5Q71M36 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cspg5Q71M36 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cspg5Q71M36 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cspg5Q71M36 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cspg5Q71M36 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.33■□□□□ 0.68
Cspg5Q71M36 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.32■□□□□ 0.68
Cspg5Q71M36 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cspg5Q71M36 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cspg5Q71M36 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.31■□□□□ 0.68
Cspg5Q71M36 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.31■□□□□ 0.68
Cspg5Q71M36 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg5Q71M36 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.3■□□□□ 0.68
Cspg5Q71M36 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Gm27275-201ENSMUST00000184318 272 ntBASIC19.3■□□□□ 0.68
Cspg5Q71M36 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.3■□□□□ 0.68
Cspg5Q71M36 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg5Q71M36 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg5Q71M36 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg5Q71M36 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg5Q71M36 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg5Q71M36 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.29■□□□□ 0.68
Cspg5Q71M36 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.29■□□□□ 0.68
Cspg5Q71M36 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cspg5Q71M36 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg5Q71M36 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms