Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Npc1l1Q6T3U4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Npc1l1Q6T3U4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Npc1l1Q6T3U4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.56■■□□□ 1.2
Npc1l1Q6T3U4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Npc1l1Q6T3U4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Npc1l1Q6T3U4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Npc1l1Q6T3U4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Npc1l1Q6T3U4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Npc1l1Q6T3U4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.54■■□□□ 1.2
Npc1l1Q6T3U4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Npc1l1Q6T3U4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Npc1l1Q6T3U4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.54■■□□□ 1.2
Npc1l1Q6T3U4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Npc1l1Q6T3U4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Npc1l1Q6T3U4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 Gm19094-201ENSMUST00000209791 1246 ntBASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Npc1l1Q6T3U4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Npc1l1Q6T3U4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Npc1l1Q6T3U4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Npc1l1Q6T3U4 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.5■■□□□ 1.19
Npc1l1Q6T3U4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Npc1l1Q6T3U4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.49■■□□□ 1.19
Npc1l1Q6T3U4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.49■■□□□ 1.19
Npc1l1Q6T3U4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Npc1l1Q6T3U4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Trmt13-210ENSMUST00000198454 880 ntBASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms