Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ccdc85bQ6PDY0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc85bQ6PDY0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc85bQ6PDY0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc85bQ6PDY0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc85bQ6PDY0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc85bQ6PDY0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc85bQ6PDY0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Gm30025-201ENSMUST00000218555 728 ntBASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc85bQ6PDY0 AA386476-201ENSMUST00000098781 1665 ntBASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc85bQ6PDY0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85bQ6PDY0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85bQ6PDY0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85bQ6PDY0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85bQ6PDY0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85bQ6PDY0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85bQ6PDY0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85bQ6PDY0 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.44■□□□□ 0.7
Ccdc85bQ6PDY0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85bQ6PDY0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85bQ6PDY0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.44■□□□□ 0.7
Ccdc85bQ6PDY0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85bQ6PDY0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms