Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Kdm3aQ6PCM1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm3aQ6PCM1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm3aQ6PCM1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm3aQ6PCM1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm3aQ6PCM1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm3aQ6PCM1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm3aQ6PCM1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm3aQ6PCM1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm3aQ6PCM1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm3aQ6PCM1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm3aQ6PCM1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm3aQ6PCM1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm3aQ6PCM1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.66■■□□□ 1.22
Kdm3aQ6PCM1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Gm27011-201ENSMUST00000182352 972 ntBASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm3aQ6PCM1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Kdm3aQ6PCM1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.64■■□□□ 1.22
Kdm3aQ6PCM1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Kdm3aQ6PCM1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Kdm3aQ6PCM1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Kdm3aQ6PCM1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Kdm3aQ6PCM1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm3aQ6PCM1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm3aQ6PCM1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm3aQ6PCM1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm3aQ6PCM1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm3aQ6PCM1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm3aQ6PCM1 Gm20049-201ENSMUST00000219950 730 ntBASIC22.61■■□□□ 1.21
Kdm3aQ6PCM1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm3aQ6PCM1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm3aQ6PCM1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Kdm3aQ6PCM1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm3aQ6PCM1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm3aQ6PCM1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm3aQ6PCM1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm3aQ6PCM1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm3aQ6PCM1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms