Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Herc4Q6PAV2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc4Q6PAV2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc4Q6PAV2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc4Q6PAV2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Gm10033-202ENSMUST00000211874 928 ntBASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Gm18671-201ENSMUST00000214826 683 ntBASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.67■□□□□ 0.9
Herc4Q6PAV2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Gm13534-201ENSMUST00000121169 513 ntBASIC20.66■□□□□ 0.9
Herc4Q6PAV2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc4Q6PAV2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc4Q6PAV2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Herc4Q6PAV2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Herc4Q6PAV2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Herc4Q6PAV2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.64■□□□□ 0.9
Herc4Q6PAV2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms