Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd3Q6P9Z1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.15■□□□□ 0.34
Smarcd3Q6P9Z1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Smarcd3Q6P9Z1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Smarcd3Q6P9Z1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smarcd3Q6P9Z1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd3Q6P9Z1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd3Q6P9Z1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Gm13241-201ENSMUST00000094493 780 ntBASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd3Q6P9Z1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 Gm12251-201ENSMUST00000117893 792 ntBASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms