Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.93■□□□□ 0.94
Abcf1Q6P542 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.92■□□□□ 0.94
Abcf1Q6P542 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcf1Q6P542 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Abcf1Q6P542 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Abcf1Q6P542 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.91■□□□□ 0.94
Abcf1Q6P542 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abcf1Q6P542 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Abcf1Q6P542 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Abcf1Q6P542 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Abcf1Q6P542 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Abcf1Q6P542 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Abcf1Q6P542 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Abcf1Q6P542 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.89■□□□□ 0.93
Abcf1Q6P542 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abcf1Q6P542 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abcf1Q6P542 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abcf1Q6P542 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abcf1Q6P542 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.88■□□□□ 0.93
Abcf1Q6P542 Gm26833-201ENSMUST00000180899 440 ntBASIC20.88■□□□□ 0.93
Abcf1Q6P542 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.88■□□□□ 0.93
Abcf1Q6P542 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.88■□□□□ 0.93
Abcf1Q6P542 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Abcf1Q6P542 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.88■□□□□ 0.93
Abcf1Q6P542 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abcf1Q6P542 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abcf1Q6P542 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Abcf1Q6P542 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Abcf1Q6P542 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.87■□□□□ 0.93
Abcf1Q6P542 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Abcf1Q6P542 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms