Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp140Q6NSQ5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp140Q6NSQ5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sp140Q6NSQ5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sp140Q6NSQ5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.02■□□□□ 0.64
Sp140Q6NSQ5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sp140Q6NSQ5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sp140Q6NSQ5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sp140Q6NSQ5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sp140Q6NSQ5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sp140Q6NSQ5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sp140Q6NSQ5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sp140Q6NSQ5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Sp140Q6NSQ5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sp140Q6NSQ5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Gm27032-201ENSMUST00000183124 1116 ntBASIC19■□□□□ 0.63
Sp140Q6NSQ5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sp140Q6NSQ5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sp140Q6NSQ5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sp140Q6NSQ5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sp140Q6NSQ5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms