Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ParpbpQ6IRT3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ParpbpQ6IRT3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ParpbpQ6IRT3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Gm42778-201ENSMUST00000199644 553 ntBASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Gm10493-201ENSMUST00000097270 612 ntBASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.54■□□□□ 0.4
ParpbpQ6IRT3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Gm5874-201ENSMUST00000096101 508 ntBASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ParpbpQ6IRT3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ParpbpQ6IRT3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ParpbpQ6IRT3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ParpbpQ6IRT3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ParpbpQ6IRT3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ParpbpQ6IRT3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ParpbpQ6IRT3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.52■□□□□ 0.4
ParpbpQ6IRT3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ParpbpQ6IRT3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ParpbpQ6IRT3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.52■□□□□ 0.39
ParpbpQ6IRT3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ParpbpQ6IRT3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.5■□□□□ 0.39
ParpbpQ6IRT3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ParpbpQ6IRT3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ParpbpQ6IRT3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ParpbpQ6IRT3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms