Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.25■□□□□ 0.67
Krt42Q6IFX2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.24■□□□□ 0.67
Krt42Q6IFX2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt42Q6IFX2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt42Q6IFX2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt42Q6IFX2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt42Q6IFX2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt42Q6IFX2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt42Q6IFX2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt42Q6IFX2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt42Q6IFX2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt42Q6IFX2 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.2■□□□□ 0.66
Krt42Q6IFX2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.2■□□□□ 0.66
Krt42Q6IFX2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Cap2-205ENSMUST00000225824 1634 ntBASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt42Q6IFX2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt42Q6IFX2 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.18■□□□□ 0.66
Krt42Q6IFX2 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.18■□□□□ 0.66
Krt42Q6IFX2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt42Q6IFX2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt42Q6IFX2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Krt42Q6IFX2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Krt42Q6IFX2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt42Q6IFX2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms