Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.2■□□□□ 0.02
Zic4Q61467 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.2■□□□□ 0.02
Zic4Q61467 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Zic4Q61467 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Zic4Q61467 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Zic4Q61467 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zic4Q61467 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.19■□□□□ 0.02
Zic4Q61467 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.19■□□□□ 0.02
Zic4Q61467 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zic4Q61467 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Zic4Q61467 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zic4Q61467 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.19■□□□□ 0.02
Zic4Q61467 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zic4Q61467 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.19■□□□□ 0.02
Zic4Q61467 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Zic4Q61467 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.19■□□□□ 0.02
Zic4Q61467 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zic4Q61467 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Zic4Q61467 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Zic4Q61467 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.18■□□□□ 0.02
Zic4Q61467 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zic4Q61467 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.17■□□□□ 0.02
Zic4Q61467 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.17■□□□□ 0.02
Zic4Q61467 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.17■□□□□ 0.02
Zic4Q61467 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Zic4Q61467 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Zic4Q61467 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zic4Q61467 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Zic4Q61467 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Zic4Q61467 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Cap2-205ENSMUST00000225824 1634 ntBASIC15.16■□□□□ 0.02
Zic4Q61467 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Zic4Q61467 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zic4Q61467 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Zic4Q61467 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Zic4Q61467 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.15■□□□□ 0.02
Zic4Q61467 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Zic4Q61467 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.15■□□□□ 0.02
Zic4Q61467 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zic4Q61467 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
Zic4Q61467 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Zic4Q61467 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zic4Q61467 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms