Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd53Q61451 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
Cd53Q61451 Gm42642-201ENSMUST00000200683 355 ntBASIC17.21■□□□□ 0.35
Cd53Q61451 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.21■□□□□ 0.35
Cd53Q61451 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cd53Q61451 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.21■□□□□ 0.35
Cd53Q61451 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
Cd53Q61451 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd53Q61451 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd53Q61451 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd53Q61451 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cd53Q61451 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cd53Q61451 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.2■□□□□ 0.34
Cd53Q61451 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Gm26833-201ENSMUST00000180899 440 ntBASIC17.2■□□□□ 0.34
Cd53Q61451 Gm37179-201ENSMUST00000194862 823 ntBASIC17.2■□□□□ 0.34
Cd53Q61451 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.2■□□□□ 0.34
Cd53Q61451 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.2■□□□□ 0.34
Cd53Q61451 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cd53Q61451 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cd53Q61451 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd53Q61451 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cd53Q61451 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cd53Q61451 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.19■□□□□ 0.34
Cd53Q61451 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Cd53Q61451 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd53Q61451 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cd53Q61451 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.18■□□□□ 0.34
Cd53Q61451 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.18■□□□□ 0.34
Cd53Q61451 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cd53Q61451 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.18■□□□□ 0.34
Cd53Q61451 Gm43060-201ENSMUST00000200621 289 ntBASIC17.18■□□□□ 0.34
Cd53Q61451 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.18■□□□□ 0.34
Cd53Q61451 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cd53Q61451 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd53Q61451 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.17■□□□□ 0.34
Cd53Q61451 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
Cd53Q61451 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.17■□□□□ 0.34
Cd53Q61451 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.17■□□□□ 0.34
Cd53Q61451 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.17■□□□□ 0.34
Cd53Q61451 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cd53Q61451 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd53Q61451 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd53Q61451 Grk6-206ENSMUST00000224995 2971 ntBASIC17.16■□□□□ 0.34
Cd53Q61451 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd53Q61451 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd53Q61451 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cd53Q61451 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd53Q61451 Gm10849-201ENSMUST00000100397 618 ntBASIC17.16■□□□□ 0.34
Cd53Q61451 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.16■□□□□ 0.34
Cd53Q61451 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.16■□□□□ 0.34
Cd53Q61451 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd53Q61451 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.16■□□□□ 0.34
Cd53Q61451 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Cd53Q61451 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd53Q61451 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd53Q61451 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd53Q61451 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms