Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfhr1Q61406 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfhr1Q61406 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfhr1Q61406 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfhr1Q61406 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfhr1Q61406 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Gm6576-201ENSMUST00000169678 883 ntBASIC16.7■□□□□ 0.26
Cfhr1Q61406 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfhr1Q61406 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfhr1Q61406 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfhr1Q61406 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfhr1Q61406 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cfhr1Q61406 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfhr1Q61406 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cfhr1Q61406 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cfhr1Q61406 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cfhr1Q61406 Gm2559-201ENSMUST00000201323 363 ntBASIC16.68■□□□□ 0.26
Cfhr1Q61406 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfhr1Q61406 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cfhr1Q61406 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cfhr1Q61406 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfhr1Q61406 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfhr1Q61406 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cfhr1Q61406 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfhr1Q61406 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cfhr1Q61406 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfhr1Q61406 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfhr1Q61406 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.67■□□□□ 0.26
Cfhr1Q61406 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Cfhr1Q61406 Golph3-202ENSMUST00000226517 2359 ntBASIC16.66■□□□□ 0.26
Cfhr1Q61406 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Gm13836-201ENSMUST00000121159 501 ntBASIC16.66■□□□□ 0.26
Cfhr1Q61406 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.66■□□□□ 0.26
Cfhr1Q61406 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cfhr1Q61406 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cfhr1Q61406 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Dio3-201ENSMUST00000097228 1449 ntBASIC16.65■□□□□ 0.26
Cfhr1Q61406 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cfhr1Q61406 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Cfhr1Q61406 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfhr1Q61406 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cfhr1Q61406 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms