Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ptch1Q61115 Odf3b-204ENSMUST00000227834 930 ntBASIC27.44■■□□□ 1.98
Ptch1Q61115 AC107452.1-201ENSMUST00000227963 481 ntBASIC27.44■■□□□ 1.98
Ptch1Q61115 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ptch1Q61115 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ptch1Q61115 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ptch1Q61115 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC27.43■■□□□ 1.98
Ptch1Q61115 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Ptch1Q61115 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Ptch1Q61115 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ptch1Q61115 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ptch1Q61115 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ptch1Q61115 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ptch1Q61115 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Ptch1Q61115 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC27.42■■□□□ 1.98
Ptch1Q61115 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ptch1Q61115 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Ptch1Q61115 Gm18025-201ENSMUST00000221733 862 ntBASIC27.42■■□□□ 1.98
Ptch1Q61115 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ptch1Q61115 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ptch1Q61115 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Ptch1Q61115 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC27.41■■□□□ 1.98
Ptch1Q61115 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Ptch1Q61115 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
Ptch1Q61115 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ptch1Q61115 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ptch1Q61115 AC156016.1-201ENSMUST00000227190 1035 ntBASIC27.41■■□□□ 1.98
Ptch1Q61115 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ptch1Q61115 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ptch1Q61115 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ptch1Q61115 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC27.4■■□□□ 1.98
Ptch1Q61115 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ptch1Q61115 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Ptch1Q61115 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Ptch1Q61115 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Ptch1Q61115 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Ptch1Q61115 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ptch1Q61115 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC27.38■■□□□ 1.97
Ptch1Q61115 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ptch1Q61115 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ptch1Q61115 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ptch1Q61115 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ptch1Q61115 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ptch1Q61115 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ptch1Q61115 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ptch1Q61115 Gm42545-201ENSMUST00000202755 922 ntBASIC27.36■■□□□ 1.97
Ptch1Q61115 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ptch1Q61115 Gm45560-201ENSMUST00000211492 1472 ntBASIC27.36■■□□□ 1.97
Ptch1Q61115 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ptch1Q61115 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
Ptch1Q61115 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ptch1Q61115 Gm23634-201ENSMUST00000175071 91 ntBASIC27.35■■□□□ 1.97
Ptch1Q61115 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ptch1Q61115 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC27.35■■□□□ 1.97
Ptch1Q61115 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Ptch1Q61115 Gm6345-202ENSMUST00000180900 204 ntBASIC27.34■■□□□ 1.97
Ptch1Q61115 Gm37292-201ENSMUST00000192062 758 ntBASIC27.34■■□□□ 1.97
Ptch1Q61115 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ptch1Q61115 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC27.34■■□□□ 1.97
Ptch1Q61115 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ptch1Q61115 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ptch1Q61115 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ptch1Q61115 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Ptch1Q61115 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ptch1Q61115 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC27.34■■□□□ 1.97
Ptch1Q61115 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ptch1Q61115 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC27.34■■□□□ 1.97
Ptch1Q61115 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Ptch1Q61115 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ptch1Q61115 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ptch1Q61115 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Ptch1Q61115 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC27.33■■□□□ 1.97
Ptch1Q61115 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 Timm23-208ENSMUST00000226683 750 ntBASIC27.33■■□□□ 1.97
Ptch1Q61115 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Ptch1Q61115 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC27.33■■□□□ 1.97
Ptch1Q61115 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch1Q61115 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Ptch1Q61115 Gm7712-202ENSMUST00000222331 1510 ntBASIC27.33■■□□□ 1.97
Ptch1Q61115 Zfp783-201ENSMUST00000095946 670 ntBASIC27.33■■□□□ 1.96
Ptch1Q61115 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ptch1Q61115 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ptch1Q61115 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ptch1Q61115 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ptch1Q61115 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ptch1Q61115 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC27.32■■□□□ 1.96
Ptch1Q61115 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC27.32■■□□□ 1.96
Ptch1Q61115 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Ptch1Q61115 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ptch1Q61115 AC124581.1-201ENSMUST00000225416 1399 ntBASIC27.31■■□□□ 1.96
Ptch1Q61115 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Ptch1Q61115 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ptch1Q61115 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms