Protein–RNA interactions for Protein: Q60841

Reln, Reelin, mousemouse

Predictions only

Length 3,461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RelnQ60841 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RelnQ60841 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RelnQ60841 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RelnQ60841 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.72■□□□□ 0.27
RelnQ60841 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.72■□□□□ 0.27
RelnQ60841 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
RelnQ60841 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.72■□□□□ 0.27
RelnQ60841 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RelnQ60841 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.72■□□□□ 0.27
RelnQ60841 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RelnQ60841 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
RelnQ60841 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.71■□□□□ 0.27
RelnQ60841 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RelnQ60841 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RelnQ60841 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
RelnQ60841 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.71■□□□□ 0.26
RelnQ60841 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RelnQ60841 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.71■□□□□ 0.26
RelnQ60841 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RelnQ60841 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RelnQ60841 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RelnQ60841 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RelnQ60841 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RelnQ60841 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.7■□□□□ 0.26
RelnQ60841 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RelnQ60841 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RelnQ60841 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RelnQ60841 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RelnQ60841 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RelnQ60841 Gm13559-201ENSMUST00000120476 863 ntBASIC16.69■□□□□ 0.26
RelnQ60841 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RelnQ60841 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RelnQ60841 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RelnQ60841 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RelnQ60841 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RelnQ60841 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RelnQ60841 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.69■□□□□ 0.26
RelnQ60841 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RelnQ60841 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RelnQ60841 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RelnQ60841 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RelnQ60841 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RelnQ60841 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RelnQ60841 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RelnQ60841 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RelnQ60841 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RelnQ60841 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.68■□□□□ 0.26
RelnQ60841 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.68■□□□□ 0.26
RelnQ60841 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RelnQ60841 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RelnQ60841 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RelnQ60841 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RelnQ60841 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RelnQ60841 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RelnQ60841 Gm21814-202ENSMUST00000203277 873 ntBASIC16.67■□□□□ 0.26
RelnQ60841 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RelnQ60841 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RelnQ60841 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.67■□□□□ 0.26
RelnQ60841 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.66■□□□□ 0.26
RelnQ60841 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.66■□□□□ 0.26
RelnQ60841 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Gm44771-201ENSMUST00000206975 626 ntBASIC16.66■□□□□ 0.26
RelnQ60841 Gm7461-201ENSMUST00000058918 827 ntBASIC16.66■□□□□ 0.26
RelnQ60841 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.66■□□□□ 0.26
RelnQ60841 Gm11539-201ENSMUST00000119837 557 ntBASIC16.66■□□□□ 0.26
RelnQ60841 Gm13436-201ENSMUST00000120418 567 ntBASIC16.66■□□□□ 0.26
RelnQ60841 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.66■□□□□ 0.26
RelnQ60841 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RelnQ60841 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms