Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-1Q5R1H8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-1Q5R1H8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-1Q5R1H8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-1Q5R1H8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-1Q5R1H8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-1Q5R1H8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Gm43530-201ENSMUST00000195920 274 ntBASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-1Q5R1H8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Gm12821-201ENSMUST00000120022 600 ntBASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-1Q5R1H8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-1Q5R1H8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-1Q5R1H8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav8d-1Q5R1H8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms