Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3hdm4Q4VBF2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
R3hdm4Q4VBF2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3hdm4Q4VBF2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3hdm4Q4VBF2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
R3hdm4Q4VBF2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
R3hdm4Q4VBF2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3hdm4Q4VBF2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
R3hdm4Q4VBF2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
R3hdm4Q4VBF2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.26■□□□□ 0.83
R3hdm4Q4VBF2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
R3hdm4Q4VBF2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
R3hdm4Q4VBF2 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.26■□□□□ 0.83
R3hdm4Q4VBF2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.26■□□□□ 0.83
R3hdm4Q4VBF2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3hdm4Q4VBF2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
R3hdm4Q4VBF2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3hdm4Q4VBF2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3hdm4Q4VBF2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3hdm4Q4VBF2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3hdm4Q4VBF2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.21■□□□□ 0.83
R3hdm4Q4VBF2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms