Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Gm10653-202ENSMUST00000139570 835 ntBASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Rab3c-203ENSMUST00000224180 967 ntBASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf223Q3UV31 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.23■□□□□ 0.51
Rnf223Q3UV31 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.23■□□□□ 0.51
Rnf223Q3UV31 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf223Q3UV31 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.23■□□□□ 0.51
Rnf223Q3UV31 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf223Q3UV31 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf223Q3UV31 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf223Q3UV31 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf223Q3UV31 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf223Q3UV31 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf223Q3UV31 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Gm20049-201ENSMUST00000219950 730 ntBASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf223Q3UV31 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf223Q3UV31 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.2■□□□□ 0.5
Rnf223Q3UV31 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf223Q3UV31 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf223Q3UV31 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms