Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Naf1Q3UMQ8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Golph3-202ENSMUST00000226517 2359 ntBASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Naf1Q3UMQ8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Naf1Q3UMQ8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Gm20049-201ENSMUST00000219950 730 ntBASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Naf1Q3UMQ8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Naf1Q3UMQ8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Naf1Q3UMQ8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Naf1Q3UMQ8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Naf1Q3UMQ8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19■□□□□ 0.63
Naf1Q3UMQ8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Rab3c-203ENSMUST00000224180 967 ntBASIC19■□□□□ 0.63
Naf1Q3UMQ8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Naf1Q3UMQ8 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.99■□□□□ 0.63
Naf1Q3UMQ8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Naf1Q3UMQ8 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.99■□□□□ 0.63
Naf1Q3UMQ8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Naf1Q3UMQ8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Naf1Q3UMQ8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Naf1Q3UMQ8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Naf1Q3UMQ8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms