Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.11■□□□□ 0.81
Smcr8Q3UMB5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smcr8Q3UMB5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Gm20760-201ENSMUST00000179197 648 ntBASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smcr8Q3UMB5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smcr8Q3UMB5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Smcr8Q3UMB5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smcr8Q3UMB5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Smcr8Q3UMB5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smcr8Q3UMB5 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.08■□□□□ 0.81
Smcr8Q3UMB5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smcr8Q3UMB5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smcr8Q3UMB5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smcr8Q3UMB5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Smcr8Q3UMB5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smcr8Q3UMB5 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smcr8Q3UMB5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Gm20049-201ENSMUST00000219950 730 ntBASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.06■□□□□ 0.8
Smcr8Q3UMB5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Gm26524-201ENSMUST00000192339 390 ntBASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smcr8Q3UMB5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smcr8Q3UMB5 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms