Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Spg11Q3UHA3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.44■□□□□ 0.38
Spg11Q3UHA3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Spg11Q3UHA3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Spg11Q3UHA3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.43■□□□□ 0.38
Spg11Q3UHA3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Spg11Q3UHA3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Spg11Q3UHA3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Gm37935-201ENSMUST00000192012 982 ntBASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Spg11Q3UHA3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Spg11Q3UHA3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Spg11Q3UHA3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Spg11Q3UHA3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Spg11Q3UHA3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Spg11Q3UHA3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Spg11Q3UHA3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Spg11Q3UHA3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Spg11Q3UHA3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.39■□□□□ 0.37
Spg11Q3UHA3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.39■□□□□ 0.37
Spg11Q3UHA3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Gm15375-201ENSMUST00000119510 849 ntBASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.38■□□□□ 0.37
Spg11Q3UHA3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Spg11Q3UHA3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Gm5587-201ENSMUST00000206270 674 ntBASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Spg11Q3UHA3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.36■□□□□ 0.37
Spg11Q3UHA3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms