Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.67■■□□□ 1.22
Carmil3Q3UFQ8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.67■■□□□ 1.22
Carmil3Q3UFQ8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Carmil3Q3UFQ8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Carmil3Q3UFQ8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Carmil3Q3UFQ8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Carmil3Q3UFQ8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Carmil3Q3UFQ8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Carmil3Q3UFQ8 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.64■■□□□ 1.22
Carmil3Q3UFQ8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Carmil3Q3UFQ8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Carmil3Q3UFQ8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Carmil3Q3UFQ8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
Carmil3Q3UFQ8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Carmil3Q3UFQ8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Carmil3Q3UFQ8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Carmil3Q3UFQ8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Carmil3Q3UFQ8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Gm11249-201ENSMUST00000117071 859 ntBASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Gm6576-201ENSMUST00000169678 883 ntBASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Gm19094-201ENSMUST00000209791 1246 ntBASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.63■■□□□ 1.21
Carmil3Q3UFQ8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Carmil3Q3UFQ8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Carmil3Q3UFQ8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Carmil3Q3UFQ8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.62■■□□□ 1.21
Carmil3Q3UFQ8 Gm18666-201ENSMUST00000190039 958 ntBASIC22.62■■□□□ 1.21
Carmil3Q3UFQ8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Carmil3Q3UFQ8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Gm22325-201ENSMUST00000158904 308 ntBASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Carmil3Q3UFQ8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Carmil3Q3UFQ8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.59■■□□□ 1.21
Carmil3Q3UFQ8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Carmil3Q3UFQ8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Carmil3Q3UFQ8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.59■■□□□ 1.21
Carmil3Q3UFQ8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.59■■□□□ 1.21
Carmil3Q3UFQ8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Gm2399-201ENSMUST00000104944 225 ntBASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Carmil3Q3UFQ8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Carmil3Q3UFQ8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Carmil3Q3UFQ8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Carmil3Q3UFQ8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Carmil3Q3UFQ8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Carmil3Q3UFQ8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms