Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col5a2Q3U962 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col5a2Q3U962 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.47■■□□□ 1.19
Col5a2Q3U962 Gm11539-201ENSMUST00000119837 557 ntBASIC22.47■■□□□ 1.19
Col5a2Q3U962 Gm13436-201ENSMUST00000120418 567 ntBASIC22.47■■□□□ 1.19
Col5a2Q3U962 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC22.47■■□□□ 1.19
Col5a2Q3U962 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Gm30025-201ENSMUST00000218555 728 ntBASIC22.47■■□□□ 1.19
Col5a2Q3U962 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Col5a2Q3U962 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Gm3375-201ENSMUST00000203929 796 ntBASIC22.47■■□□□ 1.19
Col5a2Q3U962 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Odf3b-204ENSMUST00000227834 930 ntBASIC22.47■■□□□ 1.19
Col5a2Q3U962 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Col5a2Q3U962 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col5a2Q3U962 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col5a2Q3U962 Gm7889-201ENSMUST00000185591 958 ntBASIC22.46■■□□□ 1.19
Col5a2Q3U962 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col5a2Q3U962 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col5a2Q3U962 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Col5a2Q3U962 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col5a2Q3U962 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col5a2Q3U962 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col5a2Q3U962 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.45■■□□□ 1.18
Col5a2Q3U962 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC22.45■■□□□ 1.18
Col5a2Q3U962 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Col5a2Q3U962 Flg-201ENSMUST00000050758 1488 ntBASIC22.45■■□□□ 1.18
Col5a2Q3U962 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col5a2Q3U962 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col5a2Q3U962 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col5a2Q3U962 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col5a2Q3U962 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col5a2Q3U962 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col5a2Q3U962 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col5a2Q3U962 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col5a2Q3U962 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col5a2Q3U962 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Gm27741-201ENSMUST00000185060 237 ntBASIC22.43■■□□□ 1.18
Col5a2Q3U962 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Col5a2Q3U962 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col5a2Q3U962 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col5a2Q3U962 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col5a2Q3U962 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col5a2Q3U962 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Col5a2Q3U962 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col5a2Q3U962 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.42■■□□□ 1.18
Col5a2Q3U962 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col5a2Q3U962 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col5a2Q3U962 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Gm10517-202ENSMUST00000192970 758 ntBASIC22.41■■□□□ 1.18
Col5a2Q3U962 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Col5a2Q3U962 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Col5a2Q3U962 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Col5a2Q3U962 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Col5a2Q3U962 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.39■■□□□ 1.18
Col5a2Q3U962 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Col5a2Q3U962 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col5a2Q3U962 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms