Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Gm27357-201ENSMUST00000183754 135 ntBASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Gm37292-201ENSMUST00000192062 758 ntBASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Gm21559-201ENSMUST00000220638 855 ntBASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Mtag2-201ENSMUST00000058665 714 ntBASIC10.19□□□□□ -0.78
Ush2AQ2QI47 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 AC164883.3-201ENSMUST00000227396 1774 ntBASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Gm28659-201ENSMUST00000188013 759 ntBASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ush2AQ2QI47 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Mir5130-201ENSMUST00000175160 84 ntBASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ush2AQ2QI47 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Gm27459-201ENSMUST00000184860 107 ntBASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Gm10576-201ENSMUST00000191927 825 ntBASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Gm38285-201ENSMUST00000192928 922 ntBASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Birc2-201ENSMUST00000054878 378 ntBASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ush2AQ2QI47 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Gm43575-201ENSMUST00000196420 516 ntBASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ush2AQ2QI47 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms