Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd8Q09XV5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.96■□□□□ 0.31
Chd8Q09XV5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd8Q09XV5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd8Q09XV5 Mir5130-201ENSMUST00000175160 84 ntBASIC16.96■□□□□ 0.31
Chd8Q09XV5 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.96■□□□□ 0.31
Chd8Q09XV5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd8Q09XV5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd8Q09XV5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd8Q09XV5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chd8Q09XV5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Flg-201ENSMUST00000050758 1488 ntBASIC16.95■□□□□ 0.3
Chd8Q09XV5 Gm11594-201ENSMUST00000122313 162 ntBASIC16.95■□□□□ 0.3
Chd8Q09XV5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd8Q09XV5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chd8Q09XV5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chd8Q09XV5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Chd8Q09XV5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd8Q09XV5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd8Q09XV5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd8Q09XV5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.94■□□□□ 0.3
Chd8Q09XV5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.94■□□□□ 0.3
Chd8Q09XV5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd8Q09XV5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd8Q09XV5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd8Q09XV5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd8Q09XV5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd8Q09XV5 Gm29518-201ENSMUST00000190858 372 ntBASIC16.93■□□□□ 0.3
Chd8Q09XV5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Chd8Q09XV5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd8Q09XV5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.93■□□□□ 0.3
Chd8Q09XV5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd8Q09XV5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chd8Q09XV5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd8Q09XV5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Gm2274-201ENSMUST00000184539 609 ntBASIC16.91■□□□□ 0.3
Chd8Q09XV5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd8Q09XV5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd8Q09XV5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd8Q09XV5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.9■□□□□ 0.3
Chd8Q09XV5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd8Q09XV5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Gm7370-201ENSMUST00000219471 767 ntBASIC16.9■□□□□ 0.3
Chd8Q09XV5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd8Q09XV5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Chd8Q09XV5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.89■□□□□ 0.3
Chd8Q09XV5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms