Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ebf1Q07802 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.96■□□□□ 0.63
Ebf1Q07802 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf1Q07802 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.96■□□□□ 0.63
Ebf1Q07802 Mir7071-201ENSMUST00000184847 69 ntBASIC18.96■□□□□ 0.63
Ebf1Q07802 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf1Q07802 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ebf1Q07802 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.96■□□□□ 0.63
Ebf1Q07802 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf1Q07802 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf1Q07802 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ebf1Q07802 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf1Q07802 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.95■□□□□ 0.62
Ebf1Q07802 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ebf1Q07802 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ebf1Q07802 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Ebf1Q07802 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Ebf1Q07802 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ebf1Q07802 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ebf1Q07802 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.95■□□□□ 0.62
Ebf1Q07802 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf1Q07802 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.94■□□□□ 0.62
Ebf1Q07802 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf1Q07802 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf1Q07802 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf1Q07802 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ebf1Q07802 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.94■□□□□ 0.62
Ebf1Q07802 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf1Q07802 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf1Q07802 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.94■□□□□ 0.62
Ebf1Q07802 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf1Q07802 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ebf1Q07802 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.93■□□□□ 0.62
Ebf1Q07802 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf1Q07802 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.93■□□□□ 0.62
Ebf1Q07802 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.93■□□□□ 0.62
Ebf1Q07802 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf1Q07802 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Ebf1Q07802 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf1Q07802 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.93■□□□□ 0.62
Ebf1Q07802 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf1Q07802 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf1Q07802 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ebf1Q07802 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf1Q07802 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ebf1Q07802 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.91■□□□□ 0.62
Ebf1Q07802 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf1Q07802 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf1Q07802 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ebf1Q07802 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.91■□□□□ 0.62
Ebf1Q07802 Gm22325-201ENSMUST00000158904 308 ntBASIC18.91■□□□□ 0.62
Ebf1Q07802 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.91■□□□□ 0.62
Ebf1Q07802 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf1Q07802 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ebf1Q07802 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ebf1Q07802 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ebf1Q07802 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf1Q07802 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf1Q07802 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf1Q07802 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf1Q07802 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf1Q07802 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.91■□□□□ 0.62
Ebf1Q07802 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf1Q07802 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf1Q07802 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.9■□□□□ 0.62
Ebf1Q07802 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf1Q07802 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf1Q07802 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.9■□□□□ 0.62
Ebf1Q07802 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf1Q07802 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ebf1Q07802 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf1Q07802 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf1Q07802 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf1Q07802 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ebf1Q07802 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf1Q07802 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms