Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdx4Q07424 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdx4Q07424 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdx4Q07424 Gm7291-201ENSMUST00000199147 382 ntBASIC14.46□□□□□ -0.09
Cdx4Q07424 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdx4Q07424 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdx4Q07424 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx4Q07424 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdx4Q07424 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdx4Q07424 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdx4Q07424 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx4Q07424 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx4Q07424 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Cdx4Q07424 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdx4Q07424 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx4Q07424 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.45□□□□□ -0.1
Cdx4Q07424 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx4Q07424 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.45□□□□□ -0.1
Cdx4Q07424 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx4Q07424 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx4Q07424 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx4Q07424 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx4Q07424 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdx4Q07424 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.44□□□□□ -0.1
Cdx4Q07424 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdx4Q07424 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx4Q07424 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx4Q07424 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx4Q07424 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Cdx4Q07424 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx4Q07424 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx4Q07424 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx4Q07424 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx4Q07424 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx4Q07424 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdx4Q07424 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx4Q07424 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdx4Q07424 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx4Q07424 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdx4Q07424 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdx4Q07424 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx4Q07424 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Cdx4Q07424 Gm27405-201ENSMUST00000184201 112 ntBASIC14.43□□□□□ -0.1
Cdx4Q07424 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdx4Q07424 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdx4Q07424 Gm9988-201ENSMUST00000069786 435 ntBASIC14.43□□□□□ -0.1
Cdx4Q07424 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx4Q07424 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx4Q07424 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx4Q07424 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdx4Q07424 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdx4Q07424 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdx4Q07424 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx4Q07424 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdx4Q07424 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdx4Q07424 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.41□□□□□ -0.1
Cdx4Q07424 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdx4Q07424 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdx4Q07424 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdx4Q07424 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdx4Q07424 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdx4Q07424 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdx4Q07424 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.4□□□□□ -0.1
Cdx4Q07424 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdx4Q07424 Gm27801-201ENSMUST00000184174 223 ntBASIC14.4□□□□□ -0.1
Cdx4Q07424 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdx4Q07424 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdx4Q07424 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdx4Q07424 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdx4Q07424 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdx4Q07424 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms