Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hspg2Q05793 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hspg2Q05793 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14□□□□□ -0.17
Hspg2Q05793 Gm37352-201ENSMUST00000193908 2181 ntBASIC14□□□□□ -0.17
Hspg2Q05793 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Hspg2Q05793 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hspg2Q05793 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.99□□□□□ -0.17
Hspg2Q05793 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hspg2Q05793 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Gm17971-201ENSMUST00000190239 806 ntBASIC13.99□□□□□ -0.17
Hspg2Q05793 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.99□□□□□ -0.17
Hspg2Q05793 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hspg2Q05793 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.98□□□□□ -0.17
Hspg2Q05793 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Gm15378-201ENSMUST00000121894 207 ntBASIC13.98□□□□□ -0.17
Hspg2Q05793 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.98□□□□□ -0.17
Hspg2Q05793 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Gm5417-201ENSMUST00000079706 384 ntBASIC13.98□□□□□ -0.17
Hspg2Q05793 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.98□□□□□ -0.17
Hspg2Q05793 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.98□□□□□ -0.17
Hspg2Q05793 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.98□□□□□ -0.17
Hspg2Q05793 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.98□□□□□ -0.17
Hspg2Q05793 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hspg2Q05793 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.97□□□□□ -0.17
Hspg2Q05793 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.97□□□□□ -0.17
Hspg2Q05793 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hspg2Q05793 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.97□□□□□ -0.17
Hspg2Q05793 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.97□□□□□ -0.17
Hspg2Q05793 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hspg2Q05793 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hspg2Q05793 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hspg2Q05793 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hspg2Q05793 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hspg2Q05793 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hspg2Q05793 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hspg2Q05793 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.96□□□□□ -0.17
Hspg2Q05793 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hspg2Q05793 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hspg2Q05793 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hspg2Q05793 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hspg2Q05793 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hspg2Q05793 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Hspg2Q05793 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hspg2Q05793 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hspg2Q05793 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hspg2Q05793 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.95□□□□□ -0.18
Hspg2Q05793 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hspg2Q05793 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Hspg2Q05793 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.95□□□□□ -0.18
Hspg2Q05793 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Gm18666-201ENSMUST00000190039 958 ntBASIC13.95□□□□□ -0.18
Hspg2Q05793 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hspg2Q05793 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms