Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca2P97929 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Brca2P97929 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Brca2P97929 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Brca2P97929 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca2P97929 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Brca2P97929 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca2P97929 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca2P97929 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Brca2P97929 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.29■□□□□ 0.52
Brca2P97929 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Brca2P97929 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.29■□□□□ 0.52
Brca2P97929 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Brca2P97929 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca2P97929 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Brca2P97929 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Brca2P97929 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca2P97929 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.28■□□□□ 0.52
Brca2P97929 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca2P97929 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Brca2P97929 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Brca2P97929 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca2P97929 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca2P97929 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Brca2P97929 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Brca2P97929 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca2P97929 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Brca2P97929 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Brca2P97929 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.27■□□□□ 0.52
Brca2P97929 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Brca2P97929 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Brca2P97929 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.27■□□□□ 0.52
Brca2P97929 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Brca2P97929 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.27■□□□□ 0.51
Brca2P97929 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.27■□□□□ 0.51
Brca2P97929 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Brca2P97929 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Brca2P97929 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Brca2P97929 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Brca2P97929 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.26■□□□□ 0.51
Brca2P97929 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Brca2P97929 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Brca2P97929 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca2P97929 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Brca2P97929 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.25■□□□□ 0.51
Brca2P97929 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Brca2P97929 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.25■□□□□ 0.51
Brca2P97929 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.25■□□□□ 0.51
Brca2P97929 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Gm6345-202ENSMUST00000180900 204 ntBASIC18.25■□□□□ 0.51
Brca2P97929 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.25■□□□□ 0.51
Brca2P97929 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca2P97929 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca2P97929 Gm7889-201ENSMUST00000185591 958 ntBASIC18.24■□□□□ 0.51
Brca2P97929 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.24■□□□□ 0.51
Brca2P97929 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca2P97929 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Brca2P97929 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca2P97929 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Brca2P97929 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca2P97929 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.24■□□□□ 0.51
Brca2P97929 Gm11539-201ENSMUST00000119837 557 ntBASIC18.24■□□□□ 0.51
Brca2P97929 Gm13436-201ENSMUST00000120418 567 ntBASIC18.24■□□□□ 0.51
Brca2P97929 Gm7860-201ENSMUST00000121190 879 ntBASIC18.24■□□□□ 0.51
Brca2P97929 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Brca2P97929 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.24■□□□□ 0.51
Brca2P97929 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca2P97929 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca2P97929 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca2P97929 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.23■□□□□ 0.51
Brca2P97929 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Brca2P97929 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca2P97929 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.23■□□□□ 0.51
Brca2P97929 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Brca2P97929 Gm44549-201ENSMUST00000208351 577 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms