Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SgcbP82349 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.72■□□□□ 0.27
SgcbP82349 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.72■□□□□ 0.27
SgcbP82349 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.72■□□□□ 0.27
SgcbP82349 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.72■□□□□ 0.27
SgcbP82349 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcbP82349 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.72■□□□□ 0.27
SgcbP82349 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcbP82349 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcbP82349 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SgcbP82349 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcbP82349 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcbP82349 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcbP82349 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SgcbP82349 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SgcbP82349 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SgcbP82349 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcbP82349 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcbP82349 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcbP82349 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SgcbP82349 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcbP82349 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SgcbP82349 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SgcbP82349 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Gm13534-201ENSMUST00000121169 513 ntBASIC16.7■□□□□ 0.26
SgcbP82349 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SgcbP82349 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.7■□□□□ 0.26
SgcbP82349 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.7■□□□□ 0.26
SgcbP82349 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcbP82349 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
SgcbP82349 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Gm6420-201ENSMUST00000193885 723 ntBASIC16.69■□□□□ 0.26
SgcbP82349 Gm37179-201ENSMUST00000194862 823 ntBASIC16.69■□□□□ 0.26
SgcbP82349 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Notumos-201ENSMUST00000151998 2659 ntBASIC16.69■□□□□ 0.26
SgcbP82349 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcbP82349 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.69■□□□□ 0.26
SgcbP82349 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.69■□□□□ 0.26
SgcbP82349 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcbP82349 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SgcbP82349 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SgcbP82349 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcbP82349 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcbP82349 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SgcbP82349 Nespas-201ENSMUST00000143738 1083 ntBASIC16.68■□□□□ 0.26
SgcbP82349 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.68■□□□□ 0.26
SgcbP82349 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.68■□□□□ 0.26
SgcbP82349 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcbP82349 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcbP82349 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SgcbP82349 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SgcbP82349 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcbP82349 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcbP82349 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SgcbP82349 Golph3-202ENSMUST00000226517 2359 ntBASIC16.67■□□□□ 0.26
SgcbP82349 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcbP82349 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcbP82349 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SgcbP82349 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcbP82349 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.67■□□□□ 0.26
SgcbP82349 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcbP82349 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcbP82349 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcbP82349 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
SgcbP82349 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SgcbP82349 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SgcbP82349 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SgcbP82349 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcbP82349 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SgcbP82349 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms