Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.39■□□□□ 0.85
CiitaP79621 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CiitaP79621 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CiitaP79621 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.38■□□□□ 0.85
CiitaP79621 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Rab3c-203ENSMUST00000224180 967 ntBASIC20.38■□□□□ 0.85
CiitaP79621 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.38■□□□□ 0.85
CiitaP79621 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.38■□□□□ 0.85
CiitaP79621 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CiitaP79621 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CiitaP79621 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.37■□□□□ 0.85
CiitaP79621 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.37■□□□□ 0.85
CiitaP79621 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CiitaP79621 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CiitaP79621 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CiitaP79621 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CiitaP79621 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CiitaP79621 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.36■□□□□ 0.85
CiitaP79621 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CiitaP79621 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CiitaP79621 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CiitaP79621 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.36■□□□□ 0.85
CiitaP79621 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.35■□□□□ 0.85
CiitaP79621 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.35■□□□□ 0.85
CiitaP79621 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CiitaP79621 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CiitaP79621 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CiitaP79621 Gm20049-201ENSMUST00000219950 730 ntBASIC20.34■□□□□ 0.85
CiitaP79621 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CiitaP79621 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CiitaP79621 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CiitaP79621 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CiitaP79621 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CiitaP79621 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CiitaP79621 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CiitaP79621 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CiitaP79621 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CiitaP79621 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.33■□□□□ 0.85
CiitaP79621 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.33■□□□□ 0.85
CiitaP79621 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.33■□□□□ 0.85
CiitaP79621 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CiitaP79621 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CiitaP79621 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CiitaP79621 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CiitaP79621 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.33■□□□□ 0.84
CiitaP79621 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CiitaP79621 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CiitaP79621 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.32■□□□□ 0.84
CiitaP79621 Gm10653-202ENSMUST00000139570 835 ntBASIC20.32■□□□□ 0.84
CiitaP79621 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.32■□□□□ 0.84
CiitaP79621 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CiitaP79621 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CiitaP79621 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.31■□□□□ 0.84
CiitaP79621 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CiitaP79621 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CiitaP79621 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CiitaP79621 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CiitaP79621 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.31■□□□□ 0.84
CiitaP79621 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CiitaP79621 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CiitaP79621 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms