Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.29■□□□□ 0.68
Msx3P70354 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.29■□□□□ 0.68
Msx3P70354 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.29■□□□□ 0.68
Msx3P70354 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Msx3P70354 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msx3P70354 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Msx3P70354 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.28■□□□□ 0.68
Msx3P70354 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.28■□□□□ 0.68
Msx3P70354 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msx3P70354 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msx3P70354 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msx3P70354 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.27■□□□□ 0.68
Msx3P70354 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.27■□□□□ 0.68
Msx3P70354 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Msx3P70354 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.27■□□□□ 0.68
Msx3P70354 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msx3P70354 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msx3P70354 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msx3P70354 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Msx3P70354 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msx3P70354 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msx3P70354 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msx3P70354 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msx3P70354 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.26■□□□□ 0.67
Msx3P70354 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msx3P70354 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msx3P70354 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Msx3P70354 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msx3P70354 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Msx3P70354 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Msx3P70354 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msx3P70354 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.25■□□□□ 0.67
Msx3P70354 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msx3P70354 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.25■□□□□ 0.67
Msx3P70354 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msx3P70354 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Msx3P70354 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msx3P70354 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Msx3P70354 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msx3P70354 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Msx3P70354 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msx3P70354 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msx3P70354 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msx3P70354 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msx3P70354 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msx3P70354 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msx3P70354 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msx3P70354 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msx3P70354 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.24■□□□□ 0.67
Msx3P70354 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Msx3P70354 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Msx3P70354 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msx3P70354 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msx3P70354 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.23■□□□□ 0.67
Msx3P70354 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.23■□□□□ 0.67
Msx3P70354 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.23■□□□□ 0.67
Msx3P70354 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Msx3P70354 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Msx3P70354 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.23■□□□□ 0.67
Msx3P70354 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msx3P70354 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms