Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm10013-201ENSMUST00000106074 672 ntBASIC31.15■■■□□ 2.58
Cux2P70298 Gm14464-201ENSMUST00000119658 1254 ntBASIC31.15■■■□□ 2.58
Cux2P70298 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC31.15■■■□□ 2.58
Cux2P70298 Gm10138-203ENSMUST00000206952 366 ntBASIC31.15■■■□□ 2.58
Cux2P70298 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Cux2P70298 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Cux2P70298 Gm45560-201ENSMUST00000211492 1472 ntBASIC31.15■■■□□ 2.58
Cux2P70298 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Cux2P70298 Gm32051-202ENSMUST00000197905 2385 ntBASIC31.15■■■□□ 2.58
Cux2P70298 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Cux2P70298 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC31.15■■■□□ 2.58
Cux2P70298 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Cux2P70298 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC31.15■■■□□ 2.58
Cux2P70298 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Cux2P70298 Zfp783-201ENSMUST00000095946 670 ntBASIC31.15■■■□□ 2.58
Cux2P70298 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC31.15■■■□□ 2.58
Cux2P70298 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cux2P70298 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cux2P70298 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
Cux2P70298 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Cux2P70298 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Cux2P70298 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cux2P70298 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Cux2P70298 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Cux2P70298 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Cux2P70298 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cux2P70298 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cux2P70298 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cux2P70298 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cux2P70298 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cux2P70298 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cux2P70298 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC31.12■■■□□ 2.57
Cux2P70298 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Gm15375-201ENSMUST00000119510 849 ntBASIC31.12■■■□□ 2.57
Cux2P70298 AA414768-201ENSMUST00000121924 1257 ntBASIC31.12■■■□□ 2.57
Cux2P70298 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC31.12■■■□□ 2.57
Cux2P70298 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
Cux2P70298 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cux2P70298 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cux2P70298 Gm17641-201ENSMUST00000166328 2350 ntBASIC31.11■■■□□ 2.57
Cux2P70298 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cux2P70298 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cux2P70298 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC31.11■■■□□ 2.57
Cux2P70298 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cux2P70298 Gm9103-201ENSMUST00000119371 405 ntBASIC31.1■■■□□ 2.57
Cux2P70298 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Cux2P70298 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Cux2P70298 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cux2P70298 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Cux2P70298 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cux2P70298 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cux2P70298 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC31.09■■■□□ 2.57
Cux2P70298 Ank2-226ENSMUST00000189368 339 ntBASIC31.09■■■□□ 2.57
Cux2P70298 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Cux2P70298 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cux2P70298 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cux2P70298 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cux2P70298 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cux2P70298 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cux2P70298 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cux2P70298 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cux2P70298 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Cux2P70298 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC31.07■■■□□ 2.57
Cux2P70298 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC31.07■■■□□ 2.57
Cux2P70298 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cux2P70298 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Cux2P70298 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Cux2P70298 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC31.07■■■□□ 2.56
Cux2P70298 Gm18959-201ENSMUST00000208954 655 ntBASIC31.07■■■□□ 2.56
Cux2P70298 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cux2P70298 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Cux2P70298 AC159205.6-201ENSMUST00000224935 887 ntBASIC31.06■■■□□ 2.56
Cux2P70298 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cux2P70298 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cux2P70298 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cux2P70298 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cux2P70298 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cux2P70298 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cux2P70298 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cux2P70298 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Cux2P70298 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cux2P70298 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
Cux2P70298 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cux2P70298 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms