Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
ThraP63058 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ThraP63058 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ThraP63058 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ThraP63058 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ThraP63058 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ThraP63058 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ThraP63058 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.88■□□□□ 0.61
ThraP63058 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.88■□□□□ 0.61
ThraP63058 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ThraP63058 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.88■□□□□ 0.61
ThraP63058 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ThraP63058 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ThraP63058 Gm12933-201ENSMUST00000120203 872 ntBASIC18.87■□□□□ 0.61
ThraP63058 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ThraP63058 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ThraP63058 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.87■□□□□ 0.61
ThraP63058 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ThraP63058 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.87■□□□□ 0.61
ThraP63058 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ThraP63058 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ThraP63058 Gm10602-201ENSMUST00000098239 609 ntBASIC18.87■□□□□ 0.61
ThraP63058 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.87■□□□□ 0.61
ThraP63058 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ThraP63058 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ThraP63058 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ThraP63058 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
ThraP63058 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.86■□□□□ 0.61
ThraP63058 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ThraP63058 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ThraP63058 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.86■□□□□ 0.61
ThraP63058 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ThraP63058 Gm27011-201ENSMUST00000182352 972 ntBASIC18.85■□□□□ 0.61
ThraP63058 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ThraP63058 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.85■□□□□ 0.61
ThraP63058 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ThraP63058 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.84■□□□□ 0.61
ThraP63058 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.84■□□□□ 0.61
ThraP63058 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.84■□□□□ 0.61
ThraP63058 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ThraP63058 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ThraP63058 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ThraP63058 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ThraP63058 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ThraP63058 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ThraP63058 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.83■□□□□ 0.61
ThraP63058 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ThraP63058 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ThraP63058 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.83■□□□□ 0.6
ThraP63058 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ThraP63058 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ThraP63058 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
ThraP63058 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ThraP63058 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ThraP63058 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ThraP63058 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms