Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.27■□□□□ 0.68
Ybx1P62960 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.27■□□□□ 0.68
Ybx1P62960 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ybx1P62960 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ybx1P62960 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ybx1P62960 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ybx1P62960 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ybx1P62960 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.27■□□□□ 0.67
Ybx1P62960 Dio3-201ENSMUST00000097228 1449 ntBASIC19.26■□□□□ 0.67
Ybx1P62960 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ybx1P62960 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ybx1P62960 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ybx1P62960 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ybx1P62960 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ybx1P62960 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.26■□□□□ 0.67
Ybx1P62960 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ybx1P62960 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ybx1P62960 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.26■□□□□ 0.67
Ybx1P62960 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Ybx1P62960 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Ybx1P62960 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ybx1P62960 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ybx1P62960 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ybx1P62960 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ybx1P62960 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.25■□□□□ 0.67
Ybx1P62960 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ybx1P62960 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ybx1P62960 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ybx1P62960 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ybx1P62960 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ybx1P62960 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ybx1P62960 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ybx1P62960 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.24■□□□□ 0.67
Ybx1P62960 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ybx1P62960 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ybx1P62960 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
Ybx1P62960 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.23■□□□□ 0.67
Ybx1P62960 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Ybx1P62960 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ybx1P62960 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.23■□□□□ 0.67
Ybx1P62960 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.23■□□□□ 0.67
Ybx1P62960 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ybx1P62960 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ybx1P62960 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ybx1P62960 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.23■□□□□ 0.67
Ybx1P62960 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ybx1P62960 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ybx1P62960 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ybx1P62960 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.22■□□□□ 0.67
Ybx1P62960 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ybx1P62960 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ybx1P62960 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ybx1P62960 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.22■□□□□ 0.67
Ybx1P62960 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ybx1P62960 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ybx1P62960 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Gm11249-201ENSMUST00000117071 859 ntBASIC19.21■□□□□ 0.67
Ybx1P62960 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.21■□□□□ 0.67
Ybx1P62960 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.21■□□□□ 0.67
Ybx1P62960 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.21■□□□□ 0.67
Ybx1P62960 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ybx1P62960 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ybx1P62960 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.2■□□□□ 0.66
Ybx1P62960 Gm44549-201ENSMUST00000208351 577 ntBASIC19.2■□□□□ 0.66
Ybx1P62960 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ybx1P62960 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ybx1P62960 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ybx1P62960 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ybx1P62960 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Ybx1P62960 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ybx1P62960 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ybx1P62960 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ybx1P62960 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ybx1P62960 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ybx1P62960 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ybx1P62960 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ybx1P62960 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ybx1P62960 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ybx1P62960 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ybx1P62960 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms